| 2006 | Via | Round | Rochester Rockers | |||||||
| OF Jonny Gomes | Sherwood | 1st | Chet Lutz | |||||||
| SS Brandon Wood (UC) | 1st | |||||||||
| 1B Mike Jacobs | Hartford | 1st | ||||||||
| P Jon Papelbon | 2nd | |||||||||
| SS Clint Barmes | Rocky Mt. | 3rd | ||||||||
| 2B Mark Ellis | Sherwood | 3rd | ||||||||
| P Aaron Fultz | 3rd | |||||||||
| P Fernando Cabrera | 4th | |||||||||
| P Scott Olsen | 5th | |||||||||
| P Fausto Carmona (UC) | Norfolk | 7th | ||||||||
| OF Chris Duffy | Norfolk | 8th | ||||||||
| P Ryan Dempster | Sherwood | 8th | ||||||||
| P Brandon Medders | Norfolk | 9th | ||||||||
| P Anthony Lerew | 14th | |||||||||